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Case lawCBDT Circulars & Instructions › Statutory position — s.200A: the CPC computes tax, interest and the s.234E fee on a TDS statement and issues an intimation
CBDT Circulars & InstructionsCuts both waysSuperseded by amendments.200As.234Es.200(3)s.246As.154s.156s.201s.206CBRule 31As.399 (Act of 2025)s.427 (Act of 2025)s.357 (Act of 2025)s.397 (Act of 2025)

Statutory position — s.200A: the CPC computes tax, interest and the s.234E fee on a TDS statement and issues an intimation

CPC has sent me an intimation under section 200A with a late fee on it. What does section 200A actually let them compute, when did the fee limb go in, and can I appeal it?

The Income-tax Act, 1961 was repealed on 1 April 2026. It still governs income earned up to 31 March 2026, and every proceeding about those years however late — assessment, reassessment, rectification, penalty, revision and appeal alike. Income earned from 1 April 2026 is governed by the Income-tax Act, 2025. What changed, and which Act governs your year →

CPC has sent me an intimation under section 200A with a late fee on it. What does section 200A actually let them compute, when did the fee limb go in, and can I appeal it?

Section 200A is the machinery for processing a quarterly TDS statement under the Income-tax Act, 1961. Sub-section (1) runs (a) to (f): correct arithmetical errors and incorrect claims apparent from the statement, compute interest, compute the fee under section 234E, determine the sum payable or the refund, send an intimation, and grant the refund. The fee limb is clause (c), and the old clauses (c), (d) and (e) became (d), (e) and (f) when section 52 of the Finance Act, 2015 substituted clauses (c) to (f) for clauses (c) to (e) with effect from 1 June 2015 — so a submission that still calls the intimation clause (d) or the refund clause (e) is describing the law before that date. Under the 1961 Act the intimation cannot be sent after one year from the end of the financial year in which the statement is filed, and that limit sits in the proviso to sub-section (1), not in sub-section (2); under the successor provision, section 399 of the Income-tax Act, 2025, the same one-year limit is sub-section (2) itself. The intimation is deemed a notice of demand under the proviso to section 156, is appealable to the Commissioner (Appeals) under section 246A(1)(a), and can be rectified under section 154(1)(c). Whether a section 234E fee can be charged in a section 200A intimation for a quarter before 1 June 2015 is the point on which the High Courts have split — Karnataka and Kerala for the deductor, Gujarat, Rajasthan and Madras for the Revenue — and which High Court you are in decides it.

Decided by the CBDT Circulars & Instructions (Not applicable — statutory text) on 2025-04-01, reported as Section 200A of the Income-tax Act, 1961, as amended up to 2026. It bears on section 200A, section 234E, section 200(3), section 246A, section 154, section 156, section 201, section 206CB, section Rule 31A, section 399 (Act of 2025), section 427 (Act of 2025), section 357 (Act of 2025), section 397 (Act of 2025) of the Income Tax Act 1961, in TDS Defaults, Penalty and Assessment & Scrutiny matters.

Superseded by amendment. The text above is section 200A of the Income-tax Act, 1961 as it stood at the repeal of that Act, identical clause for clause across the three most recent published versions of the section. The status is "superseded by amendment" because the 1961 Act stands repealed by section 536(1) of the Income-tax Act, 2025 from 1 April 2026; the savings in section 536(2) keep this section governing every statement up to the quarter ended 31 March 2026 and everything following from it, with section 399 governing thereafter. The 1 June 2015 change is corroborated four ways: the version published for 2015 carries the amendment in prospective form, the version for 2016 carries it in enacted form crediting Act No. 20 of 2015, the version for 2014 prints five clauses and no fee limb where the 2015 one has six, and section 52 of the Finance Act, 2015 itself says it. Rajesh Kourani, Sajeev Mathew, Conceria International, Dundlod, Bugalia and Vodafone Idea were each read in their own text and the quotations are from those readings. Fatheraj Singhvi has not been read in its own text, so what is said about the Karnataka decision is what the judgments that have been read record of it; Sarala Memorial Hospital likewise, as Sajeev Mathew describes it. Rashmikant Kundalia was read in its own text; the Supreme Court granted leave against it on 3 January 2017 and that appeal is pending. Not closed: any special leave petition against Fatheraj Singhvi, Rajesh Kourani, Dundlod or Conceria, and any High Court movement since 10 November 2023 — no Supreme Court decision resolving the split has been traced; the amending Act for clause (c) of section 154(1), which carries no footnote marker in any version read; and the overlap between the six-year second proviso to section 200(3) and section 397(3)(f) of the 2025 Act, which fixes two years and is drafted to reach statements required under section 200 of the 1961 Act, where the Board's transition FAQ says corrections for FY 2025-26 and earlier stay under the 1961 framework. The worked fee illustration is the department's own and is a 1961-Act one.

Why it matters

The date decides the money. Every quarter from 1 July 2012 to 31 May 2015 is a quarter in which section 234E was in force but section 200A(1) had no fee limb, and CPC nevertheless issued intimations charging the fee for those quarters — often years later, and often revived when a deductor files a correction statement or the demand surfaces on the TRACES portal. Whether that fee survives depends entirely on which High Court's writ jurisdiction you are in. In Karnataka and Kerala it does not; in Gujarat, Tamil Nadu and wherever the Gujarat reasoning is followed, it does. The Tribunal will apply its own jurisdictional High Court, as the Bangalore Bench did in Kooud Software, so the same facts produce opposite results in Bengaluru and Chennai. There is no Supreme Court decision closing the question. For everything after 1 June 2015 the fight is not about the fee's validity but about the machinery. The fee is capped at the tax deductible for the quarter, so a nil or near-nil quarter carries a near-nil fee however long the delay; the department's own illustration on its late-filing-fee page has 155 days of delay computing to Rs 31,000 and being cut to Rs 8,400 because that is the TDS of the quarter — 155 x 200 = 31,000, capped at 8,400. And the intimation is a deemed notice of demand, appealable under section 246A(1)(a) and rectifiable under section 154(1)(c), so a deductor who treats it as a portal entry rather than a demand loses both the appeal window that section 249(2) runs from the service of the notice of demand and, eventually, the four years under section 154(7).

Binding on the department, not on the assessee or the courts. An assessee may rely on a circular that is beneficial to them.

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Related

Other authorities on the same sections.
Every authority on the provisions this decision turns on: all 69 on s.154 · all 45 on s.201 · all 34 on s.156